研究者業績

伊庭 善孝

Yoshitaka Iba

基本情報

所属
藤田医科大学 研究支援推進本部・国際再生医療センター 助教
学位
農学修士

J-GLOBAL ID
200901043723886081
researchmap会員ID
1000306318

ヒト由来抗インフルエンザ抗体の解析を行っている。

論文

 33
  • Sumitomo-Kondo M, Ukai Y, Iba Y, Ohshima N, Miura K, Takasaki A, Kurosawa Y, Kurosawa G
    Biochemical and biophysical research communications 503(2) 1141-1147 2018年7月  査読有り
  • Hideyuki Arimitsu, Keiko Sasaki, Yoshitaka Iba, Yoshikazu Kurosawa, Toshiyasu Shimizu, Takao Tsuji
    MICROBIOLOGY AND IMMUNOLOGY 59(2) 71-81 2015年2月  査読有り
    Shiga toxin 2 (Stx2)-specific mAb-producing hybridoma clones were generated from mice. Because mice tend to produce small amounts of B subunit (Stx2B)-specific antibodies at the polyclonal antibody level after immunization via the parenteral route, mice were immunized intranasally with Stx2 toxoids with a mutant heat-labile enterotoxin as a mucosal adjuvant; 11 different hybridoma clones were obtained in two trials. Six of them were A subunit (Stx2A)-specific whereas five were Stx2B-specific antibody-producing clones. The in vitro neutralization activity of Stx2B-specific mAbs against Stx2 was greater than that of Stx2A-specific mAbs on HeLa229 cells. Furthermore, even at low concentrations two of the Stx2B-specific mAbs (45 and 75D9) completely inhibited receptor binding and showed in vivo neutralization activity against a fivefold median lethal dose of Stx2 in mice. In western blot analysis, these Stx2B-specific neutralization antibodies did not react to three different mutant forms of Stx2, each amino acid residue of which was associated with receptor binding. Additionally, the nucleotide sequences of the V-H and V-L regions of clones 45 and 75D9 were determined. Our Stx2B-specific mAbs may be new candidates for the development of mouse-human chimeric Stx2-neutralizing antibodies which have fewer adverse effects than animal antibodies for enterohemorrhagic Escherichia coli infection.
  • Yoshitaka Iba, Yoshifumi Fujii, Nobuko Ohshima, Tomomi Sumida, Ritsuko Kubota-Koketsu, Mariko Ikeda, Motoaki Wakiyama, Mikako Shirouzu, Jun Okada, Yoshinobu Okuno, Yoshikazu Kurosawa, Shigeyuki Yokoyama
    JOURNAL OF VIROLOGY 88(13) 7130-7144 2014年7月  査読有り
    Neutralizing antibodies that target the hemagglutinin of influenza virus either inhibit binding of hemagglutinin to cellular receptors or prevent the low-pH-induced conformational change in hemagglutinin required for membrane fusion. In general, the former type of antibody binds to the globular head formed by HA1 and has narrow strain specificity, while the latter type binds to the stem mainly formed by HA2 and has broad strain specificity. In the present study, we analyzed the epitope and function of a broadly neutralizing human antibody against H3N2 viruses, F005-126. The crystal structure of F005-126 Fab in complex with hemagglutinin revealed that the antibody binds to the globular head, spans a cleft formed by two hemagglutinin monomers in a hemagglutinin trimer, and cross-links them. It recognizes two peptide portions (sites L and R) and a glycan linked to asparagine at residue 285 using three complementarity-determining regions and framework 3 in the heavy chain. Binding of the antibody to sites L (residues 171 to 173, 239, and 240) and R (residues 91, 92, 270 to 273, 284, and 285) is mediated mainly by van der Waals contacts with the main chains of the peptides in these sites and secondarily by hydrogen bonds with a few side chains of conserved sequences in HA1. Furthermore, the glycan recognized by F005-126 is conserved among H3N2 viruses. F005-126 has the ability to prevent low-pH-induced conformational changes in hemagglutinin. The newly identified conserved epitope, including the glycan, should be immunogenic in humans and may induce production of broadly neutralizing antibodies against H3 viruses.
  • Peter S. Lee, Nobuko Ohshima, Robyn L. Stanfield, Wenli Yu, Yoshitaka Iba, Yoshinobu Okuno, Yoshikazu Kurosawa, Ian A. Wilson
    NATURE COMMUNICATIONS 5 3614 2014年4月  査読有り
    Influenza viruses present a significant health challenge each year, as in the H3N2 epidemic of 2012-2013. Here we describe an antibody, F045-092, that possesses broadly neutralizing activity against the entire H3 subtype and accommodates the natural variation and additional glycosylation in all strains tested from 1963 to 2011. Crystal structures of F045-092 in complex with HAs from 1975 and 2011 H3N2 viruses reveal the structural basis for its neutralization breadth through insertion of its 23-residue HCDR3 into the receptor-binding site that involves striking receptor mimicry. F045-092 extends its recognition to divergent subtypes, including H1, H2 and H13, using the enhanced avidity of its IgG to overcome lower-affinity Fab binding, as observed with other antibodies that target the receptor-binding site. This unprecedented level of antibody cross-reactivity against the H3 subtype can potentially inform on development of a pan-H3 vaccine or small-molecule therapeutics.
  • Nobuko Ohshima, Ritsuko Kubota-Koketsu, Yoshitaka Iba, Yoshinobu Okuno, Yoshikazu Kurosawa
    PLOS ONE 9(2) e87305-10 2014年2月  査読有り
    Many people have a history of catching the flu several times during childhood but no additional flu in adulthood, even without vaccination. We analyzed the total repertoire of antibodies (Abs) against influenza A group 1 viruses induced in such a flu-resistant person after vaccination with 2009 H1N1 pandemic influenza virus. They were classified into two types, with no exceptions. The first type, the products of B cells newly induced through vaccination, binds near the sialic acid-binding pocket. The second type, the products of long-lived memory B cells established before vaccination, utilizes the 1-69 V-H gene, binds to the stem of HA, and neutralizes both H1N1 and H5N1 viruses with few exceptions. These observations indicate that the sialic acid-binding pocket and its surrounding region are immunogenically very potent and majority of the B cells whose growth is newly induced by vaccination produce Abs that recognize these regions. However, they play a role in protection against influenza virus infection for a short period since variant viruses that have acquired resistance to these Abs become dominant. On the other hand, although the stem of HA is immunogenically not potent, the second type of B cells eventually becomes dominant. Thus, a selection system should function in forming the repertoire of long-lived memory B cells and the stability of the epitope would greatly affect the fate of the memory cells. Acquisition of the ability to produce Abs that bind to the stable epitope could be a major factor of flu resistance.
  • Nobuko Ohshima, Yoshitaka Iba, Ritsuko Kubota-Koketsu, Yoshizo Asano, Yoshinobu Okuno, Yoshikazu Kurosawa
    JOURNAL OF VIROLOGY 85(21) 11048-11057 2011年11月  査読有り
    Influenza A viruses are classified into 16 subtypes according to the serotypes of hemagglutinin (HA). It is generally thought that neutralizing antibodies (Abs) are not broadly cross-reactive among HA subtypes. We examined the repertoire of neutralizing Abs against influenza viruses in humans. B lymphocytes were collected from donors by apheresis, and Ab libraries were constructed by using phage-display technology. Anti-HA clones were isolated by screening with H3N2 viruses. Their binding activity was examined, and four kinds of Abs showing broad strain specificity were identified from one donor. Two of the Abs, F045-092 and F026-427, were extensively analyzed. They neutralized not only H3N2 but also H1N1, H2N2, and H5N1 viruses, although the activities were largely varied. Flow cytometry suggested that they have the ability to bind to HA and HA1 artificially expressed on the cell surface. They show hemagglutination inhibition activity and do not compete with C179, an Ab thought to bind to the stalk region. F045-092 competes with Abs that recognize sites A and B for binding to HA. Furthermore, the serine at residue 136 in site A could be a part of the epitope. Thus, it is likely that F045-092 and F026-427 bind to a conserved epitope in the head region formed by HA1. Interestingly, while the V(H)1-69 gene can encode MAbs against the HA stem that are group 1 specific, F045-092 and its relatives that recognize the head region also use V(H)1-69. The possible epitope recognized by these clones is discussed.
  • Jun Okada, Nobuko Ohshima, Ritsuko Kubota-Koketsu, Yoshitaka Iba, Sayuri Ota, Wakana Takase, Tetsushi Yoshikawa, Toyokazu Ishikawa, Yoshizo Asano, Yoshinobu Okuno, Yoshikazu Kurosawa
    JOURNAL OF GENERAL VIROLOGY 92(2) 326-335 2011年2月  査読有り
    Through extensive isolation of neutralizing mAbs against H3N2 influenza viruses representing the in vivo repertoire in a human donor, we examined the relationships between antigenic drift of influenza virus and protective antibodies generated in an infected individual. The majority of mAbs isolated from a donor born in 1960 were divided into three major groups with distinct strain specificity: 1968-1973, 1977-1993 and 1997-2003. In the present study, we developed a new method that allowed us to comprehensively determine the location of epitopes recognized by many mAbs. Original haemagglutinins (HAs) of several strains and chimaeric variants, in which one of the seven sites (A, B1, B2, C1, C2, D or E) was replaced by some other strain-derived sequence, were artificially expressed on the cell surface. The binding activity of mAbs to the HAs was examined by flow cytometry. By using this method, we determined the location of epitopes recognized by 98 different mAbs. Clones that neutralize the 1968-1973 strains bind to site B2/D, A or A/B1. While sites C, E and B were recognized by clones that neutralized the 1977-1993 strains, the majority of these clones bind to site C. Clones that neutralize the 1997-2003 strains bind to site B, A/B1, A/B2 or E/C2.
  • Jun Okada, Nobuko Ohshima, Ritsuko Kubota-Koketsu, Sayuri Ota, Wakana Takase, Masachika Azuma, Yoshitaka Iba, Naoko Nakagawa, Tetsushi Yoshikawa, Youichi Nakajima, Toyokazu Ishikawa, Yoshizo Asano, Yoshinobu Okuno, Yoshikazu Kurosawa
    VIROLOGY 397(2) 322-330 2010年2月  査読有り
    We tried to reveal the strain specificity of neutralizing mAbs against H3N2 influenza viruses in individuals. A large number of B lymphocytes of a pediatrician were collected by apheresis and two Ab libraries were constructed at 2004 and 2007 by using the phage-display technology. The libraries were screened against 12 different H3 strains Of flu isolated between 1968 and 2004. Large numbers of clones that bound to the Ags were isolated and mAbs that specifically bound to H3 strain viruses were selected. Their binding activity to the 12 strains and neutralizing activity were studied by ELISA and focus reduction test, respectively. Furthermore, the binding activity to hemagglutinin (HA) was examined by Western blot. The majority of clones showing the neutralizing activity turned out to be anti-HA mAbs and could be divided into three major groups showing distinct strain specificity: 1968-1973, 1977-1993 and 1997-2003. (C) 2009 Elsevier Inc. All rights reserved.
  • Gene Kurosawa, Mariko Sumitomo, Yasushi Akahori, Kazuki Matsuda, Chiho Muramatsu, Akihiko Takasaki, Yoshitaka Iba, Keiko Eguchi, Miho Tanaka, Kazuhiro Suzuki, Miwa Morita, Noriko Sato, Mototaka Sugiura, Atsushi Sugioka, Nobuhiro Hayashi, Yoshikazu Kurosawa
    JOURNAL OF IMMUNOLOGICAL METHODS 351(1-2) 1-12 2009年12月  査読有り
    In order to isolate monoclonal antibodies (mAbs) that bind to tumor-associated antigens (Ags) we developed the following strategy. Using the phage-display Ab library we isolated a large number of mAbs that bind to the surface of human tumor cells. The mAbs were individually screened by immunostaining, and clones that preferentially and strongly stained the malignant cells were chosen. Thereafter, the Ags recognized by the mAbs were identified. For identification of the Ags by MS candidate molecules had to be purified either by immunoprecipitation or by affinity chromatography. We isolated several hundred mAbs that showed cancer-specific staining patterns. In order to identify the Ags that were recognized by the numerous mAbs within a short time we developed two methods. Using the GFC [grouping of clones by flow cytometry (FCM)] method many Abs could be grouped by comparing the staining patterns of FCM. Members in each group turned out to bind to the same molecule in many cases. After a candidate Ag was revealed, the polypeptide corresponding to its extracellular portion was prepared and used for identification of clones that bound to the Ag among all the mAbs by SITE (simultaneous identification of clones through three dimensional ELISA) method. Both methods can be generally applicable to various kinds of membrane proteins and the mAbs against them. (C) 2009 Elsevier B.V. All rights reserved.
  • Akane Ohta, Ayano Fujita, Tsugiya Murayama, Yoshitaka Iba, Yoshikazu Kurosawa, Tetsushi Yoshikawa, Yoshizo Asano
    MICROBES AND INFECTION 11(13) 1029-1036 2009年11月  査読有り
    Human antibodies specific for HCMV are currently considered as potential anti-HCMV therapeutic agents. In this study, we used it combinatorial human antibody library to isolate and characterize complete human monoclonal antibodies that effectively neutralize HCMV In a complement-dependent manner. One hundred and six clones were isolated in two independent screens using HCMV virions and recombinant glycoprotein B, gB654, as antigens All of the clones recognized the same molecule gB and were classified into 14 groups based on the amino acid sequence of the V(H) region Seven representative clones front these 14 groups had a strong gB654 binding affinity by Surface plasmon resonance (SPR). A pairwise binding competition analysis suggested that there were three groups based on differences in the gB recognition sites Although Fab fragments of the seven groups showed strong affinity for gB, none of the Fab fragments neutralized HCMV infectivity In vitro. In contrast, complete human IgG(1) antibodies of at least three groups neutralized HCMV in a complement-dependent manner. These data suggest that potent therapeutic antibodies can be obtained from a human antibody library, including most of the functional antibodies that mediate tumoral immunity to the selected pathogen. (C) 2009 Elsevier Masson SAS. All rights reserved.
  • Yuka Kitamura, Gene Kurosawa, Miho Tanaka, Mariko Sumitomo, Chiho Muramatsu, Keiko Eguchi, Yasushi Akahori, Yoshitaka Iba, Hiroyuki Tsuda, Mototaka Sugiura, Yoshinobu Hattori, Yoshikazu Kurosawa
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 383(4) 480-484 2009年6月  査読有り
    We reported comprehensive screening for antigens (Ags) overexpressed on various carcinomas via isolation of human monoclonal antibodies (mAbs) that may be therapeutic in a previous paper (Proc. Natl. Acad. Sci. USA 105, 7287-7292, 2008). Twenty-one distinct Ags highly expressed on several carcinomas were identified and 356 mAbs with unique sequences turned Out to bind to one of of the 21 Ags. Among them CADM1/IGSF4 which had been originally referred to as tumor Suppressor lung cancer 1 (TSLC1) was included. Therefore we examined the expression of CADM1 in lung cancers in this study. Eight different anti CADM1 mAbs were used for immunohistochemical analysis of 29 fresh lung cancer specimens. Staining patterns were categorized to six groups based on the extent of positive staining and the localization of stained portions. While overexpression of CADM1 was observed on the cell surface of adenocarcinomas at a high frequency, around 60%, positive stainings were rarely observed on that of other lung carcinomas including squamous cell carcinomas. Moreover, some clones among the eight mAbs gave different staining patterns from those by the other clones against the same fresh specimen, suggesting presence of variant forms of CADM1 differentiated by mAbs. (C) 2009 Elsevier Inc. All rights reserved.
  • Yasushi Akahori, Gene Kurosawa, Mariko Sumitomo, Miwa Morita, Chiho Muramatsu, Keiko Eguchi, Miho Tanaka, Kazuhiro Suzuki, Mototaka Sugiura, Yoshitaka Iba, Atsushi Sugioka, Yoshikazu Kurosawa
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 378(4) 832-835 2009年1月  査読有り
    We developed a method termed ICOS (isolation of antigen-antibody complexes through organic solvent) for comprehensive isolation of monoclonal antibodies (mAbs) bound to molecules on the cell surface. By mixing a large number of phage particles of an antibody (Ab) library with living cells, antigen (Ag)-Ab complexes were formed on the cell surface. The mixture was overlaid on organic Solution in a tube and subjected to centrifugation. Phages bound to cells were recovered from the precipitate. The phage fraction isolated turned out to contain mAbs that bind to very heterogeneous epitopes and show strong binding activity to Ags. The ICOS method was applied to isolation of human mAbs that may be therapeutic against cancers. Sixty percent of clones isolated by the screening of a phage Ab library against cancer cells turned out to bind to various kinds of tumor-associated Ags. The precise protocol of ICOS method and the rationale of efficient screening were described. (C) 2008 Elsevier Inc. All rights reserved.
  • Gene Kurosawa, Yasushi Akahori, Miwa Morita, Mariko Sumitomo, Noriko Sato, Chiho Muramatsu, Keiko Eguchi, Kazuki Matsuda, Akihiko Takasaki, Miho Tanaka, Yoshitaka Iba, Susumu Hamada-Tsutsumi, Yoshinori Ukaie, Mamoru Shiraishi, Kazuhiro Suzuki, Maiko Kurosawa, Sally Fujiyama, Nobuhiro Takahashi, Ryoichi Kato, Yoshikazu Mizoguchi, Mikihiro Shamoto, Hiroyuki Tsuda, Mototaka Sugiurak, Yoshinobu Hattori, Shuichi Miyakawa, Ryoichi Shiroki, Kiyotaka Hoshinaga, Nobuhiro Hayashi, Atsushi Sugioka, Yoshikazu Kurosawa
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 105(20) 7287-7292 2008年5月  査読有り
    Although several murine mAbs that have been humanized became useful therapeutic agents against a few malignancies, therapeutic Abs are not yet available for the majority of the human cancers because of our lack of knowledge of which antigens (Ags) can become useful targets. In the present study we established a procedure for comprehensive identification of such Ags through the extensive isolation of human mAbs that may become therapeutic. Using the phage-display Ab library we isolated a large number of human mAbs that bind to the surface of tumor cells. They were individually screened by immunostaining, and clones that preferentially and strongly stained the malignant cells were chosen. The Ags recognized by those clones were isolated by immunoprecipitation and identified by MS. We isolated 2,114 mAbs with unique sequences and identified 21 distinct Ags highly expressed on several carcinomas. Of those 2,114 mAbs 356 bound specifically to one of the 21 Ags. After preparing complete IgG(1) Abs the in vitro assay for Ab-dependent cell-mediated cytotoxicity (ADCC) and the in vivo assay in cancer-bearing athymic mice were performed to examine antitumor activity. The mAbs converted to IgG1 revealed effective ADCC as well as antitumor activity in vivo. Because half of the 21 Ags showed distinct tumor-specific expression pattern and the mAbs isolated showed various characteristics with strong affinity to the Ag, it is likely that some of the Ags detected will become useful targets for the corresponding carcinoma therapy and that several mAbs will become therapeutic agents.
  • M Kakita, T Takahashi, T Komiya, Y Iba, T Tsuji, Y Kurosawa, M Takahashi
    INFECTION AND IMMUNITY 74(6) 3682-3683 2006年6月  査読有り
    We isolated a human monoclonal antibody against diphtheria toxin (DT). It bound to fragment B with a binding activity (K-d) of 3.01 nM. The neutralizing activity assayed by the rabbit skin test was estimated to be 73,600 IU/g. This could be used as a therapeutic drug against DT in place of the traditional equine sera.
  • K Higo-Moriguchi, Y Akahori, Y Iba, Y Kurosawa, K Taniguchi
    JOURNAL OF VIROLOGY 78(7) 3325-3332 2004年4月  査読有り
    A human antibody library constructed by utilizing a phage display system was used for the isolation of human antibodies with neutralizing activity specific for human rotavirus. In the library, the Fab form of an antibody fused to truncated cp3 is expressed on the phage surface. Purified virions of strain KU (G1 serotype and P[8] genotype) were used as antigen. Twelve different clones were isolated. Based on their amino acid sequences, they were classified into three groups. Three representative clones-1-2H, 2-3E, and 2-11G-were characterized. Enzyme-linked immunosorbent assay with virus-like particles (VLP-VP2/6 and VLP-VP2/6/7) and recombinant VP4 protein produced from baculovirus recombinants indicated that 1-2H and 2-3E bind to VP4 and that 2-11G binds to VP7. The neutralization epitope recognized by each of the three human antibodies might be human specific, since all of the antigenic mutants resistant to mouse monoclonal neutralizing antibodies previously prepared were neutralized by the human antibodies obtained here. After conversion from the Fab form of an antibody into immunoglobulin G1, the neutralizing activities of these three clones toward various human rotavirus strains were examined. The 1-2H antibody exhibited neutralizing activity toward human rotaviruses with either the P[4] or P[8] genotype. Similarly, the 2-3E antibody showed cross-reactivity against HRVs with the P[6], as well as the P[8] genotype. In contrast, the 2-11G antibody neutralized only human rotaviruses with the G1 serotype. The concentration of antibodies required for 50% neutralization ranged from 0.8 to 20 mug/ml.
  • A Ideno, M Furutani, T Iwabuchi, T Iida, Y Iba, Y Kurosawa, H Sakuraba, T Ohshima, Y Kawarabayashi, T Maruyama
    APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 64(1) 99-105 2004年3月  査読有り
    Improper protein-folding often results in inclusion-body formation in a protein expression system using Escherichia coli. To express such proteins in the soluble fraction of E. coli cytoplasm, we developed an expression system by fusing the target protein with an archaeal FK506 binding protein (FKBP). It has been reported that an archaeal FKBP from a hyperthermophilic archaeon, Thermococcus sp. KS-1 (TcFKBP18), possesses not only peptidyl-prolyl cis-trans isomerase activity, but also chaperone-like activity to enhance the refolding yield of an unfolded protein by suppressing irreversible protein aggregation. To study the effect of this fusion strategy with FKBP on the expression of foreign protein in E. coli, a putative rhodanese (thiosulfate sulfurtransferase) from a hyperthermophilic archaeon and two mouse antibody fragments were used as model target proteins. When they were expressed alone in E. coli, they formed insoluble aggregates. Their genes were designed to be expressed as a fusion protein by connecting them to the C-terminal end of TcFKBP18 with an oligopeptide containing a thrombin cleavage site. By fusing TcFKBP18, the expression of the target protein in the soluble fraction was significantly increased. The percentage of the soluble form in the expressed protein reached 10-28% of the host soluble proteins. After purification and protease digestion of the expressed antibody fragment-TcFKBP18 fusion protein, the cleaved antibody fragment (single-chain Fv) showed specific binding to the antigen in ELISA. This indicated that the expressed antibody fragment properly folded to the active form.
  • Ideno A, Furutani M, Iba Y, Kurosawa Y, Maruyama T
    Applied and environmental microbiology 68(2) 464-469 2002年2月  査読有り
  • Yoshitaka Iba
    Jpn. J. Cancer. Clin. 48(2) 55-66 2002年  招待有り
  • Iba Y, Miyazaki C, Kurosawa Y
    Methods in molecular biology (Clifton, N.J.) 178 259-267 2002年  査読有り
  • K Morino, H Katsumi, Y Akahori, Y Iba, M Shinohara, Y Ukai, Y Kohara, Y Kurosawa
    JOURNAL OF IMMUNOLOGICAL METHODS 257(1-2) 175-184 2001年11月  査読有り
    We developed a system by which antibodies, fused to fluorescent proteins with different wavelengths, can be prepared within a month against various antigens. An antibody library composed of a large number of single-chain Fv-CL fragment was constructed by means of a phage-display system. The constructs were designed to facilitate changing of the protein forms by simple enzyme manipulation. In the present study, we adopted a molecular form of antibody in which a single-chain Fv-CL fragment is fused with a green fluorescent protein (GFP) or red fluorescent protein (RFP). In addition, a His-tag was inserted between CL and GFP (or RFP). We describe the utility of this system using Caenorhabditis elegans embryo as a model. (C) 2001 Elsevier Science B.V. All rights reserved.
  • 伊庭善孝
    分子精神医学 1(2) 56-57 2001年  招待有り
  • 伊庭善孝
    実験医学 18(4) 481-486 2000年  査読有り
  • C Miyazaki, Y Iba, Y Yamada, H Takahashi, J Sawada, Y Kurosawa
    PROTEIN ENGINEERING 12(5) 407-415 1999年5月  査読有り
    The specificity for 11-deoxycortisol (11-DOC) of a monoclonal antibody (mAb), designated SCET, was changed to specificity for cortisol (CS) by site-specific mutagenesis followed by random mutagenesis. The Fab form of SCET was expressed on the surface of a phage, During the first step, mutations were introduced at 14 amino acid positions in three complementarity-determining regions (CDRs) of the VH domain that seemed likely to form the steroid-binding pocket. A clone, DcC16, was isolated from the resultant library with multiple mutations and this clone was shown to have CS-binding activity but also to retain high 11-DOC-binding activity. During the second step, mutations were introduced randomly into the entire V-H- coding region of the DcC16 clone by an error-prone polymerase chain reaction, and CS-specific mutant antibodies were selected in the presence of 11-DOC as a competitor. Three representative clones were analyzed with the BIAcore instrument, and each revealed a large increase in the binding constant for CS and a decrease in that for 11-DOC. Structural models, constructed by computer simulation, indicated the probable molecular basis for these changes in specificity.
  • Y Iba, N Hayashi, J Sawada, K Titani, Y Kurosawa
    PROTEIN ENGINEERING 11(5) 361-370 1998年5月  査読有り
    An attempt was made to change the specificity of antibodies (Abs) by introduction of mutations. A monoclonal Ab specific for 17 alpha-hydroxyprogesterone (17-OHP) was used as the starting Ab, On the basis of a model that was generated by a computer-driven model-building system, we constructed a phage-display library of Abs in which 16 residues were mutated in three complementarity-determining regions of the heavy chain that appeared to form the steroid-binding pocket. We screened the library with 17-OHP and cortisol that had been conjugated with bovine serum albumin, and we isolated many clones that had retained 17-OHP-binding ability as well as clones with the newly developed ability to bind cortisol in addition to 17-OHP, We compared the amino acid sequences between 17-OHP-specific and cortisol-binding Abs, and then constructed several additional Abs, Our results indicated that a change in specificity could be achieved by changing only a single, critical amino acid residue. Models of the 17-OHP- and cortisol-binding pockets formed by the mutated Abs could explain these observations.
  • Y Iba, W Ito, Y Kurosawa
    GENE 194(1) 35-46 1997年7月  査読有り
    We prepared three kinds of phagemid vector that permit the simultaneous introduction of highly diverged sequences into six complementarity-determining regions (CDRs) of an antibody (Ab) by the polymerase chain reaction (PCR) with degenerate oligodeoxynucleotide (oligo) primers. The phages expressed either the Fv, single-chain Fv (sc Fv) or Fab form of an Ab fused with a half-molecule of cpIII on the surface of M13 phage. A phage-display library, composed of 2 x 10(8) independent clones, was constructed; the phages that were specific for hen egg-white lysozyme (HEL) were selected by three rounds of panning; and 20 clones were isolated. The isolated clones consisted of 17 different clones. Among them, 16 clones expressed proteins that were able to bind to HEL. The association constants for binding of the encoded proteins to HEL ranged from 1.48 x 10(6) to 7.71 x 10(6)/M. These vectors allowed us to prepare many libraries of artificial Ab in which the sequences of six CDRs were very different and reflected the artificial sequences that had been designed for the degenerate oligo that we used as primers for PCR. The libraries should be also useful for the analysis of relationships between the sequences of the CDRs and antigen (Ag) specificity. (C) 1997 Elsevier Science B.V.
  • Y Iba, Y Kurosawa
    IMMUNOLOGY AND CELL BIOLOGY 75(2) 217-221 1997年4月  招待有り
    Construction of libraries of artificial antibodies has been reported by several groups of investigators. Various forms of antibody fused to a surface protein, cpIII, are expressed on the surface of filamentous phage. Since phages that encode desired antibodies can be easily grown in Escherichia coli after selection with target antigens, the phage-display antibody system appears to be very useful for various biological purposes. In this brief review, recent progress in research into the production of artificial antibodies is summarized and the strategies used for the construction of libraries of artificial antibodies are compared.
  • K YASUKAWA, T KANEKO, Y IBA, K HIRAYAMA, Y KONDO, T SAWADA, M SOWA, JJL HO, YS KIM, YS CHUNG
    INTERNATIONAL JOURNAL OF ONCOLOGY 6(5) 1047-1051 1995年5月  査読有り
    A murine monoclonal antibody, designated Nd2, was generated using a purified mucin from the human pancreatic cancer cell line SW1990 as the immunogen. Administration of Nd2 into the patients with pancreatic cancer has shown that Nd2 is of clinical use for in vivo diagnostics of pancreatic cancer. In this study, starting with a previously established hybridoma producing Nd2, we have established a transfected cell line expressing a recombinant chimeric Nd2 composed of mouse-derived antigen-binding variable regions and human-derived constant regions. The chimeric Nd2 was shown to bind purified mucin from SW1990 cells with the same dose-response curve as the original Nd2. Immunohistochemical experiments have shown that the reactivity of the chimeric Nd2 in normal and malignant pancreatic tissue is also the same as that of the original Nd2. Replacement of a substantial portion of the mouse protein makes this chimeric Nd2 more promising for clinical application than the original mouse-derived Nd2 because its antigenicity is expected to be reduced.
  • Y IBA, T KANEKO, T EKIDA, K MIYATA, K INOUYE, Y KUROSAWA, K YASUKAWA
    BIOTECHNOLOGY LETTERS 17(2) 135-138 1995年2月  査読有り
    New type of plasmids named pEdHCG1 and pEdHC kappa.were constructed. A combination of two plasmids containing the amplified gene product for the variable region of the antibody (Ab) heavy or light chains by the polymerase chain reaction (PCR) was co-transfected into COS cells to transiently express and in Chinese hamster ovary (CHO) cells to constitutively express chimeric Ab composed of the mouse-derived variable region and human-derived constant region.
  • K TAKAGI, K YASUKAWA, Y IBA, Y ISOBE, Y SUKETA, R KANNAGI, K KOHDA, M TAKAGI, T IMANAKA
    JOURNAL OF FERMENTATION AND BIOENGINEERING 79(5) 405-409 1995年  査読有り
    Starting with a previously established hybridoma producing a monoclonal antibody (F1 alpha 75) against a synthetic glycolipid, in which the carbohydrate moiety was artificially designed to be putatively cancer-specific, we cloned complementary DNA (cDNA) for active variable regions of both heavy and light chains of the antibody. We established a Chinese hamster ovary (CHO) cell line expressing a recombinant F1 alpha 75 of human IgG class. The recombinant F1 alpha 75 retained the binding ability to its antigen and was easily purified. The result suggests that the conversion into the IgG class by genetic engineering is useful for antibodies of the IgM class which are difficult to be purified due to aggregation. Sequence analysis of variable regions of F1 alpha 75 revealed no strong homology with an antibody against galactose, the terminal residue of the synthetic glycolipid, suggesting the clinical usefulness of the recombinant F1 alpha 75.
  • W ITO, Y IBA, Y KUROSAWA
    JOURNAL OF BIOLOGICAL CHEMISTRY 268(22) 16639-16647 1993年8月  査読有り
    We constructed a library of 512 kinds of Fv fragment, derivatives of a monoclonal antibody, D1.3, specific for hen egg-white lysozyme, in which a total of nine of the original amino acids were replaced by closely related amino acids at positions in the complementarity-determining regions of the H chain. More than 80% of the clones in the library produced Fv fragments in Escherichia coli. Two wild-type and 13 mutant Fv fragments were prepared in large quantities and subjected to analysis by differential titration calorimetry. The association constants of the 15 Fv fragments with hen egg-white lysozyme were distributed between 0.12 x 10(7) and 1.59 x 10(8) M-1. The changes in DELTAH-0 and -TDELTAS0 caused by one-point mutation at each position did not have intrinsic values for each change. The same changes at one position had different effects on K(A), DELTAH-0, and -TDELTAS0 when differences had been introduced in other regions. The DELTA(DELTAG0) caused by a single-point mutation ranged from -0.56 to 1.56 kcal/mol. By contrast, the DELTA(DELTAH-0) and DELTA(-TDELTAS0) caused by a single-point mutation ranged from -3.5 to 3.4 and from -3.8 to 3.4 kcal/mol, respectively. When antibodies gain the binding energy contributed by the effects of enthalpy, they lose the binding energy contributed by the effects of entropy and vice versa. In general, changes in entropy compensate for changes in enthalpy.
  • T KANEKO, Y IBA, K ZENITA, K SHIGETA, K NAKANO, W ITOH, Y KUROSAWA, R KANNAGI, K YASUKAWA
    JOURNAL OF BIOCHEMISTRY 113(1) 114-117 1993年1月  査読有り
    Stage-specific embryonic antigen-1 (SSEA-1) is a well-known carbohydrate antigen that is specifically expressed on the surface of cancer cells as well as embryonic cells. In this study, starting with a previously established hybridoma producing a monoclonal antibody (named H18A) to Lewis Y antigen, which is closely related to SSEA-1, we cloned genomic DNA encoding active variable regions both of heavy and light chains of the antibody. Sequence analysis showed that V(H) and V(kappa) genes of H18A were in the V(H)7183 family and V(kappa)C1 family, respectively. A transfected cell line named HC-H18A-7 expressing a recombinant chimeric H18A composed of mouse-derived antigen-binding variable regions and human-derived constant regions was established. The chimeric H18A was purified to homogeneity and shown to bind purified Lewis Y antigen with the same dose-response curve as the original H18A. The chimeric H18A looks more promising for clinical application than the original mouse-derived H18A because its antigenicity is expected to be reduced.
  • Y IBA, K MURATA, A KIMURA
    AGRICULTURAL AND BIOLOGICAL CHEMISTRY 52(10) 2633-2634 1988年10月  査読有り
  • K MURATA, Y IBA, Y INOUE, A KIMURA
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 153(2) 767-772 1988年6月  査読有り

MISC

 2

共同研究・競争的資金等の研究課題

 4

その他

 1
  • タンパク質の発現および生産技術(目的とするタンパク質の遺伝子を、大腸菌、バキュロウイルス、動物細胞の発現系で発現させ、タンパク質を精製する技術。) *本研究シーズに関する産学共同研究の問い合わせは藤田医科大学産学連携推進セン ター(fuji-san@fujita-hu.ac.jp)まで