CVClient

Ryuichi Okamoto

  (岡本 隆一)

Profile Information

Affiliation
University of Hyogo
Degree
Ph.D in science(Mar, 2007, Keio University)

J-GLOBAL ID
201701008627776120
researchmap Member ID
B000282831

Papers

 45
  • Yoshihiro Osaka, Ryuichi Okamoto, Tomonari Sumi, Kenichiro Koga, Hiroshi Imamura, Tsuyoshi Shirai, Yasuhiro Isogai
    The Journal of Chemical Physics, 162(5), Feb 4, 2025  
    Polyethylene glycol (PEG) is a widely used precipitant to concentrate proteins. The effect of PEG is generally understood to be an entropic attraction between proteins due to the depletion effect of PEG around proteins. However, measurements by Bloustine et al. [Phys. Rev. Lett. 96, 087803 (2006)] of the liquid–liquid phase separation (LLPS) temperature have shown that a lysozyme solution is stabilized and destabilized by the addition of low and high molecular-weight PEG, respectively. They also presented a theoretical model of the LLPS temperature as a virial expansion of the free energy and concluded that, in addition to the depletion effect, the attractive interaction between protein and PEG is necessary to explain the experiments. In the present study, theoretical calculations based on liquid-state density functional theory utilizing coarse-grained models are conducted to demonstrate that the protein–PEG effective attraction is responsible for the suppression and promotion of LLPS upon the addition of low- and high-weight PEG, respectively. In contrast, if the interactions between the protein and the PEG are solely due to the excluded volume effect, PEG of any molecular weight destabilizes the solution. These results suggest the necessity to reconsider the conventional understanding of the effects of polymer addition, which have been historically attributed to solely the depletion force.
  • Ryuichi Okamoto
    Physica A: Statistical Mechanics and its Applications, Aug, 2024  Peer-reviewedLead authorCorresponding author
  • Ryuichi Okamoto, Hirotoshi Akiyama, Rio Nakae, Yudai Tanaka, Hitoshi Washizu
    Langmuir, Jul 23, 2024  Peer-reviewedLead authorCorresponding author
  • Noa Nakata, Ryuichi Okamoto, Tomonari Sumi, Kenichiro Koga, Takeshi Morita, Hiroshi Imamura
    Protein Science, Aug, 2023  Peer-reviewed
  • Aoi Taira, Ryuichi Okamoto, Tomonari Sumi, Kenichiro Koga
    Physical Chemistry Chemical Physics, 2023  
    The three important contributions to the solvation free energy of alcohols in water are quantified as functions of temperature and pressure based the perturbation combining method and other step-wise methods.

Misc.

 1

Professional Memberships

 1

Research Projects

 4